Professor of Chemical Physics

The self-assembly of complex mesoscopic structures, the folding of proteins, and the complicated phenomenology of glasses are all manifestations of the underlying potential energy surface (PES). In each of these fields related ideas have emerged to explain and predict chemical and physical properties in terms of the PES. In studies of clusters and glasses the PES itself is often investigated directly, whereas for proteins and other biomolecules it is also common to define free energy surfaces, as the figure below illustrates for lysozyme.

Applications of energy landscape theory in my group range from studies of tunnelling splitting patterns in small molecules to computer simulation of protein folding and misfolding, including aggregation of misfolded proteins. Other active research topics include global optimisation and investigation of how the thermodynamic and dynamic properties of glasses are related to the underlying PES.

Two recent advances are now providing new insight into larger systems. Discrete path sampling enables dynamical properties to be obtained efficiently, and is being used to calculate folding rates for proteins. Unexpected connections between dynamics and thermodynamics have also been revealed by the application of catastrophe theory to energy landscapes, and new results are now being obtained to characterize phase transitions.

Publications

Terahertz VRT spectroscopy of the water hexamer-d12 prism: Dramatic enhancement of bifurcation tunneling upon librational excitation
WTS Cole, JD Farrell, AA Sheikh, Ö Yönder, RS Fellers, MR Viant, DJ Wales, RJ Saykally
Journal of Chemical Physics
(2018)
148
Structure, thermodynamics, and rearrangement mechanisms in gold clusters-insights from the energy landscapes framework.
D Schebarchov, F Baletto, DJ Wales
Nanoscale
(2018)
10
Energy Landscape and Pathways for Transitions between Watson-Crick and Hoogsteen Base Pairing in DNA.
D Chakraborty, DJ Wales
Journal of Physical Chemistry Letters
(2018)
9
Path Integral Energy Landscapes for Water Dimer
CL Vaillant, SC Althorpe, DJ Wales
J Chem Theory Comput
(2018)
15
Kinetics of Molecular Diffusion and Self-Assembly: Glycine on Cu{110}
JB Rommel, DJ Wales
Journal of Physical Chemistry C
(2017)
122
Structure and Thermodynamics of Metal Clusters on Atomically Smooth Substrates.
M Eckhoff, D Schebarchov, DJ Wales
The journal of physical chemistry letters
(2017)
8
Pathways for diffusion in the potential energy landscape of the network glass former SiO2
S Niblett, M Biedermann, DJ Wales, VK de Souza
Journal of Chemical Physics
(2017)
147
Multifunctional energy landscape for a DNA G-quadruplex: An evolved molecular switch.
TBN Cragnolini, D Chakraborty, J Šponer, P Derreumaux, S Pasquali, D Wales
Journal of Chemical Physics
(2017)
147
Properties of kinetic transition networks for atomic clusters and glassy solids.
JWR Morgan, D Mehta, DJ Wales
Physical Chemistry Chemical Physics
(2017)
19
Exploiting sparsity in free energy basin-hopping
KH Sutherland-Cash, RG Mantell, DJ Wales
Chemical Physics Letters
(2017)
685

Head of group

Research Interest Groups

Telephone number

01223 336354

Email address

Upcoming Events

Energy Landscapes 2026 Telluride

Click on an image to view animations from Energy Landscapes of Model Knotted Polymers, Journal of Chemical Theory and Computation, Tongfan Hao, Yinghao Ge, Mark A. Miller, Agustin L. N. Francesco, David J. Wales, DOI 10.1021/acs.jctc.5c01005

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