Professor of Chemical Physics

The self-assembly of complex mesoscopic structures, the folding of proteins, and the complicated phenomenology of glasses are all manifestations of the underlying potential energy surface (PES). In each of these fields related ideas have emerged to explain and predict chemical and physical properties in terms of the PES. In studies of clusters and glasses the PES itself is often investigated directly, whereas for proteins and other biomolecules it is also common to define free energy surfaces, as the figure below illustrates for lysozyme.

Applications of energy landscape theory in my group range from studies of tunnelling splitting patterns in small molecules to computer simulation of protein folding and misfolding, including aggregation of misfolded proteins. Other active research topics include global optimisation and investigation of how the thermodynamic and dynamic properties of glasses are related to the underlying PES.

Two recent advances are now providing new insight into larger systems. Discrete path sampling enables dynamical properties to be obtained efficiently, and is being used to calculate folding rates for proteins. Unexpected connections between dynamics and thermodynamics have also been revealed by the application of catastrophe theory to energy landscapes, and new results are now being obtained to characterize phase transitions.

Publications

Energy landscapes for a machine-learning prediction of patient discharge
R Das, DJ Wales
Phys Rev E
(2016)
93
Conformational Energy Landscape of the Ritonavir Molecule.
D Chakraborty, N Sengupta, DJ Wales
Journal of Physical Chemistry B
(2016)
120
Dynamical properties of two- and three-dimensional colloidal clusters of six particles
B Fačkovec, JWR Morgan, DJ Wales
Phys Chem Chem Phys
(2016)
18
Energy landscapes for a machine learning application to series data
AJ Ballard, JD Stevenson, R Das, DJ Wales
The Journal of Chemical Physics
(2016)
144
Concerted hydrogen-bond breaking by quantum tunneling in the water hexamer prism.
JO Richardson, C Pérez, S Lobsiger, AA Reid, B Temelso, GC Shields, Z Kisiel, DJ Wales, BH Pate, SC Althorpe
Science (New York, N.Y.)
(2016)
351
Quantum tunneling splittings from path-integral molecular dynamics
E Mátyus, DJ Wales, SC Althorpe
J Chem Phys
(2016)
144
Energy landscapes and persistent minima.
JM Carr, D Mazauric, F Cazals, DJ Wales
J Chem Phys
(2016)
144
Turning intractable counting into sampling: Computing the configurational entropy of three-dimensional jammed packings.
S Martiniani, KJ Schrenk, JD Stevenson, DJ Wales, D Frenkel
Physical review. E
(2016)
93
Grand and Semigrand Canonical Basin-Hopping.
F Calvo, D Schebarchov, DJ Wales
Journal of Chemical Theory and Computation
(2016)
12
Rovibrational transitions of the methane–water dimer from intermolecular quantum dynamical computations
J Sarka, AG Császár, SC Althorpe, DJ Wales, E Mátyus
Phys Chem Chem Phys
(2016)
18

Head of group

Research Interest Groups

Telephone number

01223 336354

Email address