Professor of Chemical Physics

The self-assembly of complex mesoscopic structures, the folding of proteins, and the complicated phenomenology of glasses are all manifestations of the underlying potential energy surface (PES). In each of these fields related ideas have emerged to explain and predict chemical and physical properties in terms of the PES. In studies of clusters and glasses the PES itself is often investigated directly, whereas for proteins and other biomolecules it is also common to define free energy surfaces, as the figure below illustrates for lysozyme.

Applications of energy landscape theory in my group range from studies of tunnelling splitting patterns in small molecules to computer simulation of protein folding and misfolding, including aggregation of misfolded proteins. Other active research topics include global optimisation and investigation of how the thermodynamic and dynamic properties of glasses are related to the underlying PES.

Two recent advances are now providing new insight into larger systems. Discrete path sampling enables dynamical properties to be obtained efficiently, and is being used to calculate folding rates for proteins. Unexpected connections between dynamics and thermodynamics have also been revealed by the application of catastrophe theory to energy landscapes, and new results are now being obtained to characterize phase transitions.

Publications

Structural transitions and global minima of sodium chloride clusters
JPK Doye, DJ Wales
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(1999)
59
Rearrangements of Water Dimer and Hexamer
DJ Wales
(1999)
The effect of the range of the potential on the structure and stability of simple liquids: from clusters to bulk, from sodium to
JPK Doye, DJ Wales
Journal of Physics B: Atomic, Molecular and Optical Physics
(1999)
29
The dynamics of structural transitions in sodium chloride clusters
JPK Doye, DJ Wales
J. Chem. Phys.
(1999)
111
Thermodynamics and the global optimization of Lennard-Jones clusters
JPK Doye, DJ Wales, MA Miller
Journal of Chemical Physics
(1998)
109
Relaxation dynamics of C60
TR Walsh, DJ Wales
Journal of Chemical Physics
(1998)
109
Symmetry, near-symmetry and energetics (vol 285, pg 330, 1998)
DJ Wales
Chem. Phys. Lett.
(1998)
294
Archetypal energy landscapes
DJ Wales, MA Miller, TR Walsh
Nature
(1998)
394
Infrared spectra of argon clusters
A DULLWEBER, DJ WALES
Molecular Physics
(1998)
94
Influence of the atom–atom interaction anisotropy on the structure and stability of ArnCl2 clusters
FY Naumkin, DJ Wales
Chemical Physics Letters
(1998)
290

Head of group

Research Interest Groups

Telephone number

01223 336354

Email address

Click on an image to view animations from Energy Landscapes of Model Knotted Polymers, Journal of Chemical Theory and Computation, Tongfan Hao, Yinghao Ge, Mark A. Miller, Agustin L. N. Francesco, David J. Wales, DOI 10.1021/acs.jctc.5c01005

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