Professor of Chemical Physics

The self-assembly of complex mesoscopic structures, the folding of proteins, and the complicated phenomenology of glasses are all manifestations of the underlying potential energy surface (PES). In each of these fields related ideas have emerged to explain and predict chemical and physical properties in terms of the PES. In studies of clusters and glasses the PES itself is often investigated directly, whereas for proteins and other biomolecules it is also common to define free energy surfaces, as the figure below illustrates for lysozyme.

Applications of energy landscape theory in my group range from studies of tunnelling splitting patterns in small molecules to computer simulation of protein folding and misfolding, including aggregation of misfolded proteins. Other active research topics include global optimisation and investigation of how the thermodynamic and dynamic properties of glasses are related to the underlying PES.

Two recent advances are now providing new insight into larger systems. Discrete path sampling enables dynamical properties to be obtained efficiently, and is being used to calculate folding rates for proteins. Unexpected connections between dynamics and thermodynamics have also been revealed by the application of catastrophe theory to energy landscapes, and new results are now being obtained to characterize phase transitions.

Publications

The effect of dispersion damping functions on the structure of water clusters
J Hernández-Rojas, DJ Wales
Chemical Physics
(2014)
444
Superposition-Enhanced Estimation of Optimal Temperature Spacings for Parallel Tempering Simulations.
AJ Ballard, DJ Wales
J Chem Theory Comput
(2014)
10
Direct observation of intermediates in a thermodynamically controlled solid-state dynamic covalent reaction.
AM Belenguer, GI Lampronti, DJ Wales, JKM Sanders
J Am Chem Soc
(2014)
136
Structure Prediction for Multicomponent Materials Using Biminima
D Schebarchov, DJ Wales
Phys Rev Lett
(2014)
113
Large-Scale Density Functional Theory Transition State Searching in Enzymes
G Lever, DJ Cole, R Lonsdale, KE Ranaghan, DJ Wales, AJ Mulholland, C-K Skylaris, MC Payne
The journal of physical chemistry letters
(2014)
5
Investigating the Solid-Liquid Phase Transition of Water Nanofilms Using the Generalized Replica Exchange Method
Q Lu, J Kim, JD Farrell, DJ Wales, JE Straub
The Journal of Chemical Physics
(2014)
141
Investigating the solid-liquid phase transition of water nanofilms using the generalized replica exchange method.
Q Lu, J Kim, JD Farrell, DJ Wales, JE Straub
The Journal of chemical physics
(2014)
141
Communication: Newton homotopies for sampling stationary points of potential energy landscapes.
D Mehta, T Chen, JD Hauenstein, DJ Wales
The Journal of Chemical Physics
(2014)
141
Superposition enhanced nested sampling
S Martiniani, JD Stevenson, DJ Wales, D Frenkel
Physical Review X
(2014)
4
Communication: Optimal parameters for basin-hopping global optimization based on Tsallis statistics
C Shang, DJ Wales
The Journal of Chemical Physics
(2014)
141

Head of group

Research Interest Groups

Telephone number

01223 336354

Email address

Upcoming Events

Energy Landscapes 2026 Telluride

Click on an image to view animations from Energy Landscapes of Model Knotted Polymers, Journal of Chemical Theory and Computation, Tongfan Hao, Yinghao Ge, Mark A. Miller, Agustin L. N. Francesco, David J. Wales, DOI 10.1021/acs.jctc.5c01005

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