Professor of Chemical Physics

The self-assembly of complex mesoscopic structures, the folding of proteins, and the complicated phenomenology of glasses are all manifestations of the underlying potential energy surface (PES). In each of these fields related ideas have emerged to explain and predict chemical and physical properties in terms of the PES. In studies of clusters and glasses the PES itself is often investigated directly, whereas for proteins and other biomolecules it is also common to define free energy surfaces, as the figure below illustrates for lysozyme.

Applications of energy landscape theory in my group range from studies of tunnelling splitting patterns in small molecules to computer simulation of protein folding and misfolding, including aggregation of misfolded proteins. Other active research topics include global optimisation and investigation of how the thermodynamic and dynamic properties of glasses are related to the underlying PES.

Two recent advances are now providing new insight into larger systems. Discrete path sampling enables dynamical properties to be obtained efficiently, and is being used to calculate folding rates for proteins. Unexpected connections between dynamics and thermodynamics have also been revealed by the application of catastrophe theory to energy landscapes, and new results are now being obtained to characterize phase transitions.

Publications

Global minima of transition metal clusters described by Finnis-Sinclair potentials: A comparison with semi-empirical molecular orbital theory
JA Elliott, Y Shibuta, DJ Wales
The Philosophical Magazine A Journal of Theoretical Experimental and Applied Physics
(2009)
89
Stepwise melting of a model glass former under confinement
F Calvo, DJ Wales
The Journal of Chemical Physics
(2009)
131
Mechanisms for H2 reduction on the PdO{101} surface and the Pd{100}-(√5 × √5)R27°-O surface oxide
M Blanco-Reys, DJ Wales, SJ Jenkins
Journal of Physical Chemistry C
(2009)
113
Mechanisms for H-2 Reduction on the PdO{101} Surface and the Pd{100}-(root 5 x root 5)R27 degrees-O Surface Oxide
M Blanco-Rey, DJ Wales, SJ Jenkins
The Journal of Physical Chemistry C
(2009)
113
The kinetics and structure of protein energy landscape
MC Prentiss, DJ Wales, PG Wolynes
ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY
(2009)
238
Theory of NHx ± H Reactions on Fe{211}
HL Mckay, SJ Jenkins, DJ Wales
The Journal of Physical Chemistry C
(2009)
113
Defect motifs for spherical topologies
DJ Wales, H McKay, EL Altschuler
Phys. Rev. B
(2009)
79
Calculating rate constants and committor probabilities for transition networks by graph transformation.
DJ Wales
Journal of Chemical Physics
(2009)
130
Connectivity in the potential energy landscape for binary Lennard-Jones systems
VK de Souza, DJ Wales
The Journal of chemical physics
(2009)
130
Computer Simulations of Peptides from the p53 DNA Binding Domain
M Khalili, DJ Wales
Journal of chemical theory and computation
(2009)
5

Head of group

Research Interest Groups

Telephone number

01223 336354

Email address