Professor of Chemical Physics

The self-assembly of complex mesoscopic structures, the folding of proteins, and the complicated phenomenology of glasses are all manifestations of the underlying potential energy surface (PES). In each of these fields related ideas have emerged to explain and predict chemical and physical properties in terms of the PES. In studies of clusters and glasses the PES itself is often investigated directly, whereas for proteins and other biomolecules it is also common to define free energy surfaces, as the figure below illustrates for lysozyme.

Applications of energy landscape theory in my group range from studies of tunnelling splitting patterns in small molecules to computer simulation of protein folding and misfolding, including aggregation of misfolded proteins. Other active research topics include global optimisation and investigation of how the thermodynamic and dynamic properties of glasses are related to the underlying PES.

Two recent advances are now providing new insight into larger systems. Discrete path sampling enables dynamical properties to be obtained efficiently, and is being used to calculate folding rates for proteins. Unexpected connections between dynamics and thermodynamics have also been revealed by the application of catastrophe theory to energy landscapes, and new results are now being obtained to characterize phase transitions.

Publications

Transmembrane Structures for Alzheimer’s Aβ1−42 Oligomers
B Strodel, JWL Lee, CS Whittleston, DJ Wales
J Am Chem Soc
(2010)
132
Effect of hydrogen bonding on the dynamical stability of water clusters
JR Green, TS Hofer, DJ Wales
ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY
(2010)
240
Energy landscapes of clusters bound by short-ranged potentials
DJ Wales
ChemPhysChem
(2010)
11
The Energy Landscape, Folding Pathways and the Kinetics of a Knotted Protein
MC Prentiss, DJ Wales, PG Wolynes
PLoS Comput Biol
(2010)
6
Modelling the internal structure of nascent soot particles
TS Totton, D Chakrabarti, AJ Misquitta, M Sander, DJ Wales, M Kraft
Combustion and Flame
(2010)
157
Hydrogen on graphene under stress: Molecular dissociation and gap opening
H McKay, DJ Wales, SJ Jenkins, JA Verges, PL de Andres
Physical Review B Condensed Matter and Materials Physics
(2010)
81
Interpolation schemes for peptide rearrangements
MS Bauer, B Strodel, SN Fejer, EF Koslover, DJ Wales
J Chem Phys
(2010)
132
Energy landscapes: some new horizons.
DJ Wales
Current opinion in structural biology
(2010)
20
Symmetrization of the AMBER and CHARMM Force Fields
E MaƂolepsza, B Strodel, M Khalili, S Trygubenko, SN Fejer, DJ Wales
Journal of Computational Chemistry
(2010)
31
Emergent Complexity from Simple Anisotropic Building Blocks: Shells, Tubes and Spirals
SN Fejer, D Chakrabarti, DJ Wales
ACS Nano
(2010)
4

Head of group

Research Interest Groups

Telephone number

01223 336354

Email address

Upcoming Events

Energy Landscapes 2026 Telluride

Click on an image to view animations from Energy Landscapes of Model Knotted Polymers, Journal of Chemical Theory and Computation, Tongfan Hao, Yinghao Ge, Mark A. Miller, Agustin L. N. Francesco, David J. Wales, DOI 10.1021/acs.jctc.5c01005

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