Professor of Chemical Physics

The self-assembly of complex mesoscopic structures, the folding of proteins, and the complicated phenomenology of glasses are all manifestations of the underlying potential energy surface (PES). In each of these fields related ideas have emerged to explain and predict chemical and physical properties in terms of the PES. In studies of clusters and glasses the PES itself is often investigated directly, whereas for proteins and other biomolecules it is also common to define free energy surfaces, as the figure below illustrates for lysozyme.

Applications of energy landscape theory in my group range from studies of tunnelling splitting patterns in small molecules to computer simulation of protein folding and misfolding, including aggregation of misfolded proteins. Other active research topics include global optimisation and investigation of how the thermodynamic and dynamic properties of glasses are related to the underlying PES.

Two recent advances are now providing new insight into larger systems. Discrete path sampling enables dynamical properties to be obtained efficiently, and is being used to calculate folding rates for proteins. Unexpected connections between dynamics and thermodynamics have also been revealed by the application of catastrophe theory to energy landscapes, and new results are now being obtained to characterize phase transitions.

Publications

Characterization of Anharmonicities on Complex Potential Energy Surfaces: Perturbation Theory and Simulation
F Calvo, JPK Doye, DJ Wales
Journal of Chemical Physics
(2001)
115
Modeling the structure of clusters ofC60molecules
JPK Doye, DJ Wales, W Branz, F Calvo
Physical Review B Condensed Matter and Materials Physics
(2001)
64
Crystals of binary Lennard-Jones solids
TF Middleton, J Hernández-Rojas, PN Mortenson, DJ Wales
Phys. Rev. B
(2001)
6418
A Microscopic Basis for the Global Appearance of Energy Landscapes
DJ Wales
Science
(2001)
293
Comment on "effect of potential energy distribution on the melting of clusters"
F Calvo, JPK Doye, DJ Wales
Physical Review Letters
(2001)
87
Comment on "Effect of potential energy distribution on the melting of clusters"
F Calvo, JP Doye, DJ Wales
Phys Rev Lett
(2001)
8711
Connections between structure, thermodynamics, and dynamics of finite systems and bulk material.
DJ Wales
ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY
(2001)
222
Statistical thermodynamics - Taking a walk on a landscape
CL Brooks, JN Onuchic, DJ Wales
Science
(2001)
293
Energy landscapes of some model glass formers
TF Middleton, DJ Wales
Physical Review B
(2001)
64
Polytetrahedral Clusters
JP Doye, DJ Wales
Physical review letters
(2001)
86

Head of group

Research Interest Groups

Telephone number

01223 336354

Email address

Click on an image to view animations from Energy Landscapes of Model Knotted Polymers, Journal of Chemical Theory and Computation, Tongfan Hao, Yinghao Ge, Mark A. Miller, Agustin L. N. Francesco, David J. Wales, DOI 10.1021/acs.jctc.5c01005

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