Professor of Chemical Physics

The self-assembly of complex mesoscopic structures, the folding of proteins, and the complicated phenomenology of glasses are all manifestations of the underlying potential energy surface (PES). In each of these fields related ideas have emerged to explain and predict chemical and physical properties in terms of the PES. In studies of clusters and glasses the PES itself is often investigated directly, whereas for proteins and other biomolecules it is also common to define free energy surfaces, as the figure below illustrates for lysozyme.

Applications of energy landscape theory in my group range from studies of tunnelling splitting patterns in small molecules to computer simulation of protein folding and misfolding, including aggregation of misfolded proteins. Other active research topics include global optimisation and investigation of how the thermodynamic and dynamic properties of glasses are related to the underlying PES.

Two recent advances are now providing new insight into larger systems. Discrete path sampling enables dynamical properties to be obtained efficiently, and is being used to calculate folding rates for proteins. Unexpected connections between dynamics and thermodynamics have also been revealed by the application of catastrophe theory to energy landscapes, and new results are now being obtained to characterize phase transitions.

Publications

100 Years of the Lennard-Jones Potential
P Schwerdtfeger, DJ Wales
J Chem Theory Comput
(2024)
20
A Multilevel Framework for Analysis of Protein Folding Involving Disulphide Bond Formation
PA Wesołowski, DJ Wales, P Pracht
J Phys Chem B
(2024)
128
Unusual Facet-Dependent Sintering in Pd–TiO2 Catalysts Revealed by Theory and Experiment
S Li, Y Xia, Y Ou, Z Wu, Z Jin, L Wang, X Meng, Z-K Han, W Yuan, Y Jiang, DJ Wales, H Yang, Y Wang
ACS Catalysis
(2024)
14
Analysis and interpretation of first passage time distributions featuring rare events
EJ Woods, DJ Wales
Physical chemistry chemical physics : PCCP
(2024)
26
On the Global Minimum of the Classical Potential Energy for Clusters Bound by Many-Body Forces
MK-H Kiessling, DJ Wales
Journal of Statistical Physics
(2024)
191
Combining experiment and energy landscapes to explore anaerobic heme breakdown in multifunctional hemoproteins
AD Keith, EB Sawyer, DCY Choy, Y Xie, GS Biggs, OJ Klein, PD Brear, DJ Wales, PD Barker
Physical chemistry chemical physics : PCCP
(2024)
26
Insights into machine learning models from chemical physics: an energy landscapes approach (EL for ML)
MP Niroomand, L Dicks, EO Pyzer-Knapp, DJ Wales
Digital Discovery
(2024)
3
Effect of Cooling Rate and Molecular Weight on the Non- Isothermal Crystallization of Polyethylene
T Hao, X Li, DJ Wales, Y Ming, Y Nie, Z Zhou, D Yan
(2024)
Complexes of Counterion-Trapped Molecules: Extreme Polarity, Rich IR-Activity, and Internal-Field Moderated Transformations
FY Naumkin, M Sullivan, DJ Wales
(2024)
34
On the global minimum of the classical potential energy for clusters bound by many-body forces
MK-H Kiessling, DJ Wales
(2023)

Head of group

Research Interest Groups

Telephone number

01223 336354

Email address

Click on an image to view animations from Energy Landscapes of Model Knotted Polymers, Journal of Chemical Theory and Computation, Tongfan Hao, Yinghao Ge, Mark A. Miller, Agustin L. N. Francesco, David J. Wales, DOI 10.1021/acs.jctc.5c01005

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