Professor of Chemical Physics

The self-assembly of complex mesoscopic structures, the folding of proteins, and the complicated phenomenology of glasses are all manifestations of the underlying potential energy surface (PES). In each of these fields related ideas have emerged to explain and predict chemical and physical properties in terms of the PES. In studies of clusters and glasses the PES itself is often investigated directly, whereas for proteins and other biomolecules it is also common to define free energy surfaces, as the figure below illustrates for lysozyme.

Applications of energy landscape theory in my group range from studies of tunnelling splitting patterns in small molecules to computer simulation of protein folding and misfolding, including aggregation of misfolded proteins. Other active research topics include global optimisation and investigation of how the thermodynamic and dynamic properties of glasses are related to the underlying PES.

Two recent advances are now providing new insight into larger systems. Discrete path sampling enables dynamical properties to be obtained efficiently, and is being used to calculate folding rates for proteins. Unexpected connections between dynamics and thermodynamics have also been revealed by the application of catastrophe theory to energy landscapes, and new results are now being obtained to characterize phase transitions.

Publications

Energy Landscapes for Electronic Structure
HGA Burton, DJ Wales
J Chem Theory Comput
(2020)
17
Optimal dimensionality reduction of Markov chains using graph transformation
D Kannan, DJ Sharpe, TD Swinburne, DJ Wales
Journal of Chemical Physics
(2020)
153
Systematic Evaluation of ReaxFF Reactive Force Fields for Biochemical Applications
E Moerman, D Furman, DJ Wales
Journal of Chemical Theory and Computation
(2020)
17
Rare events and first passage time statistics from the energy landscape
TD Swinburne, D Kannan, DJ Sharpe, DJ Wales
Journal of Chemical Physics
(2020)
153
Energy Landscape for the Membrane Fusion Pathway in Influenza A Hemagglutinin From Discrete Path Sampling.
DF Burke, RG Mantell, CE Pitt, DJ Wales
Frontiers in chemistry
(2020)
8
Fragility and correlated dynamics in supercooled liquids.
A Banerjee, DJ Wales
The Journal of Chemical Physics
(2020)
153
Archetypal landscapes for deep neural networks
PC Verpoort, AA Lee, DJ Wales
Proc Natl Acad Sci U S A
(2020)
117
Protein energy landscape exploration with structure-based models.
S Neelamraju, DJ Wales, S Gosavi
Current Opinion in Structural Biology
(2020)
64
Improving double-ended transition state searches for soft-matter systems.
K Röder, DJ Wales
The Journal of chemical physics
(2020)
153
Efficient and exact sampling of transition path ensembles on Markovian networks
DJ Sharpe, DJ Wales
The Journal of chemical physics
(2020)
153

Head of group

Research Interest Groups

Telephone number

01223 336354

Email address