Professor of Chemical Physics

The self-assembly of complex mesoscopic structures, the folding of proteins, and the complicated phenomenology of glasses are all manifestations of the underlying potential energy surface (PES). In each of these fields related ideas have emerged to explain and predict chemical and physical properties in terms of the PES. In studies of clusters and glasses the PES itself is often investigated directly, whereas for proteins and other biomolecules it is also common to define free energy surfaces, as the figure below illustrates for lysozyme.

Applications of energy landscape theory in my group range from studies of tunnelling splitting patterns in small molecules to computer simulation of protein folding and misfolding, including aggregation of misfolded proteins. Other active research topics include global optimisation and investigation of how the thermodynamic and dynamic properties of glasses are related to the underlying PES.

Two recent advances are now providing new insight into larger systems. Discrete path sampling enables dynamical properties to be obtained efficiently, and is being used to calculate folding rates for proteins. Unexpected connections between dynamics and thermodynamics have also been revealed by the application of catastrophe theory to energy landscapes, and new results are now being obtained to characterize phase transitions.

Publications

Mode-specificity and transition state-specific energy redistribution in the chemisorption of CH4 on Ni{100}
M Sacchi, DJ Wales, SJ Jenkins
Physical chemistry chemical physics : PCCP
(2012)
14
Beryllium cluster cages endohedrally doped by hydrogen: H 2@Be n (8 ≤ n ≤ 14)
FY Naumkin, DJ Wales
International Journal of Quantum Chemistry
(2012)
112
Quasi-Continuous Interpolation Scheme for Pathways between Distant Configurations
DJ Wales, JM Carr
Journal of chemical theory and computation
(2012)
8
Hydrogen trapped in Be n cluster cages: The atomic encapsulation option
FY Naumkin, DJ Wales
Chemical Physics Letters
(2012)
545
A Local Rigid Body Framework for Global Optimization of Biomolecules
H Kusumaatmaja, CS Whittleston, DJ Wales
Journal of chemical theory and computation
(2012)
8
Chaotic dynamics near steep transition states
JR Green, TS Hofer, DJ Wales, RS Berry
Molecular Physics
(2012)
110
Decoding the energy landscape: extracting structure, dynamics and thermodynamics
DJ Wales
Philosophical Transactions of the Royal Society A: Mathematical, Physical and Engineering Sciences
(2012)
370
Bond-selective energy redistribution in the chemisorption of CH 3D and CD 3H on Pt{110}-(1×2): A first-principles molecular dynamics study
M Sacchi, DJ Wales, SJ Jenkins
Computational and Theoretical Chemistry
(2012)
990
Pinning down the water hexamer
RJ Saykally, DJ Wales
Science
(2012)
336
Evolution of the Potential Energy Landscape with Static Pulling Force for Two Model Proteins
DJ Wales, T Head-Gordon
Journal of Physical Chemistry B
(2012)
116

Head of group

Research Interest Groups

Telephone number

01223 336354

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