Professor of Chemical Physics

The self-assembly of complex mesoscopic structures, the folding of proteins, and the complicated phenomenology of glasses are all manifestations of the underlying potential energy surface (PES). In each of these fields related ideas have emerged to explain and predict chemical and physical properties in terms of the PES. In studies of clusters and glasses the PES itself is often investigated directly, whereas for proteins and other biomolecules it is also common to define free energy surfaces, as the figure below illustrates for lysozyme.

Applications of energy landscape theory in my group range from studies of tunnelling splitting patterns in small molecules to computer simulation of protein folding and misfolding, including aggregation of misfolded proteins. Other active research topics include global optimisation and investigation of how the thermodynamic and dynamic properties of glasses are related to the underlying PES.

Two recent advances are now providing new insight into larger systems. Discrete path sampling enables dynamical properties to be obtained efficiently, and is being used to calculate folding rates for proteins. Unexpected connections between dynamics and thermodynamics have also been revealed by the application of catastrophe theory to energy landscapes, and new results are now being obtained to characterize phase transitions.

Publications

A left-handed building block self-assembles into right- and left-handed helices
SW Olesen, SN Fejer, D Chakrabarti, DJ Wales
RSC Advances
(2013)
3
Energy landscapes and global thermodynamics for alanine peptides.
S Somani, DJ Wales
The Journal of Chemical Physics
(2013)
139
Energy landscapes, structural topologies and rearrangement mechanisms in clusters of dipolar particles
JD Farrell, C Lines, JJ Shepherd, D Chakrabarti, MA Miller, DJ Wales
Soft Matter
(2013)
9
Visualizing basins of attraction for different minimization algorithms.
D Asenjo, JD Stevenson, DJ Wales, D Frenkel
J Phys Chem B
(2013)
117
Local frustration determines molecular and macroscopic helix structures
CJ Forman, SN Fejer, D Chakrabarti, PD Barker, DJ Wales
J Phys Chem B
(2013)
117
Communication: Certifying the potential energy landscape.
D Mehta, JD Hauenstein, DJ Wales
J Chem Phys
(2013)
138
Defect motifs for constant mean curvature surfaces.
H Kusumaatmaja, DJ Wales
Physical Review Letters
(2013)
110
Symmetrisation schemes for global optimisation of atomic clusters
MT Oakley, RL Johnston, DJ Wales
Physical Chemistry Chemical Physics
(2013)
15
Designing a Bernal spiral from patchy colloids.
JWR Morgan, D Chakrabarti, N Dorsaz, DJ Wales
ACS nano
(2013)
7
Investigation of Terahertz Vibration–Rotation Tunneling Spectra for the Water Octamer
JO Richardson, DJ Wales, SC Althorpe, RP McLaughlin, MR Viant, O Shih, RJ Saykally
The journal of physical chemistry. A
(2013)
117

Head of group

Research Interest Groups

Telephone number

01223 336354

Email address

Upcoming Events

Energy Landscapes 2026 Telluride

Click on an image to view animations from Energy Landscapes of Model Knotted Polymers, Journal of Chemical Theory and Computation, Tongfan Hao, Yinghao Ge, Mark A. Miller, Agustin L. N. Francesco, David J. Wales, DOI 10.1021/acs.jctc.5c01005

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