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  • Currently displaying 121 - 140 of 709 publications
Author(s)
Publication title
Journal Name
Publication year
Protein energy landscape exploration with structure-based models
S Neelamraju, DJ Wales, S Gosavi
Current opinion in structural biology
(2020)
64
Improving double-ended transition state searches for soft-matter systems.
K Röder, DJ Wales
The Journal of chemical physics
(2020)
153
A well-behaved theoretical framework for ReaxFF reactive force fields.
D Furman, DJ Wales
The Journal of Chemical Physics
(2020)
153
Efficient and exact sampling of transition path ensembles on Markovian networks.
DJ Sharpe, DJ Wales
The Journal of Chemical Physics
(2020)
153
Energy Landscapes of Deoxyxylo- and Xylo-Nucleic Acid Octamers.
DJ Sharpe, K Röder, DJ Wales
Journal of Physical Chemistry B
(2020)
124
From sticky-hard-sphere to Lennard-Jones-type clusters
L Trombach, RS Hoy, DJ Wales, P Schwerdtfeger
Physical Review E
(2020)
97
Defining, Calculating, and Converging Observables of a Kinetic Transition Network.
TD Swinburne, DJ Wales
Journal of Chemical Theory and Computation
(2020)
16
Perspective: New Insights From Loss Function Landscapes of Neural Networks
SR Chitturi, PC Verpoort, AA Lee, DJ Wales
Machine Learning Science and Technology
(2020)
1
Affinity-selected bicyclic peptide G-quadruplex ligands mimic a protein-like binding mechanism
KC Liu, K Röder, C Mayer, S Adhikari, DJ Wales, S Balasubramanian
Journal of the American Chemical Society
(2020)
142
Counterion‐Trapped‐Molecules: From High Polarity and Enriched IR Spectra to Induced Isomerization
FY Naumkin, DJ Wales
Chemphyschem
(2020)
21
Multifunnel Energy Landscapes for Phosphorylated Translation Repressor 4E-BP2 and Its Mutants
W Kang, F Jiang, Y-D Wu, DJ Wales
Journal of chemical theory and computation
(2020)
16
A multifunnel energy landscape encodes the competing $\alpha$-helix and $\beta$-hairpin conformations for a designed peptide
D Chakraborty, Y Chebaro, DJ Wales
Physical chemistry chemical physics : PCCP
(2020)
22
Flip rearrangement in the water pentamer: Analysis of electronic structure
T Xu, X Bin, SR Kirk, DJ Wales, S Jenkins
International Journal of Quantum Chemistry
(2019)
120
Nested Basin-Sampling
D Wales, M Griffiths
Journal of Chemical Physics
(2019)
15
Transforming the Accuracy and Numerical Stability of ReaxFF Reactive Force Fields
D Furman, DJ Wales
Journal of Physical Chemistry Letters
(2019)
10
Structural transitions in the RNA 7SK 5' hairpin and their effect on HEXIM binding.
K Röder, G Stirnemann, A-C Dock-Bregeon, DJ Wales, S Pasquali
Nucleic acids research
(2019)
48
Energy Landscapes and Hybridization Pathways for DNA Hexamer Duplexes
S Xiao, DJ Sharpe, D Chakraborty, DJ Wales
The Journal of Physical Chemistry Letters
(2019)
10
Tunneling Splittings in Water Clusters from Path Integral Molecular Dynamics.
CL Vaillant, DJ Wales, SC Althorpe
J Phys Chem Lett
(2019)
10
Morphological analysis of chiral rod clusters from a coarse-grained single-site chiral potential
BJ Sutherland, SW Olesen, H Kusumaatmaja, JWR Morgan, DJ Wales
Soft matter
(2019)
15
Morphological analysis of chiral rod clusters from a coarse-grained single-site chiral potential
BJ Sutherland, SW Olesen, H Kusumaatmaja, JWR Morgan, DJ Wales
(2019)

Click on an image to view animations from Energy Landscapes of Model Knotted Polymers, Journal of Chemical Theory and Computation, Tongfan Hao, Yinghao Ge, Mark A. Miller, Agustin L. N. Francesco, David J. Wales, DOI 10.1021/acs.jctc.5c01005

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